Molecular Diagnosis of Cancer: Methods and Protocols

Front Cover
Joseph E. Roulston, John M. S. Bartlett
Springer Science & Business Media, 2008 M02 1 - 394 pages
We are currently experiencing a fundamental shift in the way in which we approach the characterization of cancer. Never before has the make up of cancer tissues and individual cells been so exhaustively researched and char- terized. We are now capable of producing molecular “fingerprints” that ch- acterize the expression of all known and unknown genes within tumors and their surrounding tissues. More than 30,000 different genes may be measured in each patient’s tumor in a single experiment. Simultaneously, novel therapies that exploit the molecular roadmap have been developed and are now being offered to patients. These novel agents, such as Glivec, Herceptin, Iressa, and others, specifically target individual genes within tumors and can produce d- matic responses in some patients. These drugs are only the forerunners of a coming tidal wave of novel therapeutics that individually target specific m- ecules within cancer cells—more than 300 such agents are currently in phase I or II clinical trials. This is an exciting time for cancer specialists and patients alike. However, if we have learned anything from the past 50 or more years of research into cancer, it is that Lord Beaverbrook, in founding the British national health service in the 1950s, was frighteningly prescient when he defined the primary goal of health care to be “Diagnosis, Diagnosis, Diag- sis. ” Now, more than ever, it is essential that appropriate diagnostic methods and approaches are applied to the selection of patients for treatment.
 

Contents

Assessment of Predictive Values of Tumor Markers
13
Anthony Rhodes and Diana M Barnes 4 Extraction of Nucleic Acid Templates
29
Microdissection and Extraction of DNA From Archival Tissue
71
Fluorescence In Situ Hybridization for BCRABL
103
Marie Jarosova 12 Molecular Characterization of Human Papillomaviruses
145
TP53 Mutation Detection by SSCP and Sequencing
191
Bone Marrow Biopsies
209
Theory and Methods
217
Determination of Cyclin D1 Expression by Quantitative RealTime
277
and Its Splice Variants by RTPCR
297
W Nicol Keith and Aileen J Monaghan
311
Identification of TP53 Mutations in Human Cancers
323
Detection of Kras Mutations by a Microelectronic DNA Chip
337
Ekaterina Pestova Kim Wilber and Walter King
355
Tissue Microarrays
377
Index
391

The Diagnostic and Prognostic Significance of the Methylation
251
Quantitative Analysis of PRAME for Detection of Minimal
267

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